Professor Jessie Kennedy

Member of the Centre for Information and Software Systems.

Principal investigator on: MATSE, MAX, Timber Research Community Web Portal, Festivals Project, SEEK, Visualisation Tools for Integrating Large Alternative Linnaean Taxonomies, TDWG Core Ontology, TDWG Taxon Concept Transfer Schema, Capturing and Relating Character Concept Definitions in Plant Taxonomy, Interactive Visualisation Tools for Supporting Taxonomists working Practice, Prometheus, Systematic Generic Support for User Interfaces to Databases, Innovation award with ExtraMed, Sub contract from A Davidson's PoC to develop visualisation

Co-investigator on: OPaL

Graham, M., Kennedy, J. (2009). A Survey of Multiple Tree Visualisation. To appear in Information Visualization, , (), .

Kennedy, J., Cannon, A. (2009). Form. In: Liu, L., Özsu, M. (Eds.) Encyclopedia of Database Systems, , () (). (pp. ). : Springer-Verlag.

Graham, M., Kennedy, J. (2009, ). Re-architecting Visualizations to Java Swing. Paper presented at REVISE: Refactoring Visualization from Experience, VizWeek Workshop, Atlantic City, NJ.

Craig, P., Kennedy, J. (2009, ). Refactoring Data Transforms in MaTSE for Flexibility. Paper presented at REVISE: Refactoring Visualization from Experience, VizWeek Workshop, Atlantic City, NJ.

Li, C., Liu, X., Kennedy, J. (2009). A Multiple Viewed Interrelated Ontology Model for Holistic Component Specification and Retrieval. In: editors, e. (Ed.) Springer-Verlag's LNCS, , () (). (pp. 50-69). : Springer-Verlag.

Li, C., Liu, X., Kennedy, J. (2008). Semantics-Based Component Repository: State of Arts and a Calculation Rating Factor-based Framework. In: (Ed.) Proceedings of Computer Software and Applications Conference, , () (). (pp. 751-756). : IEEE Computer Society Press.

Graham, M., Craig, P., Kennedy, J. (2008). Visualisation to Aid Biodiversity Studies through Accurate Taxonomic Reconciliation. In: Gray, A., Jeffery, K., Shao, J. (Eds.) Proceedings of British National Conference on Database Systems: Sharing Data, Information and Knowledge, 5071/2008, () (LNCS 5071). (pp. 280-291). Cardiff, UK: Springer-Verlag.

Craig, P., Kennedy, J. (2008). Concept Relationship Editor: A visual interface to support the assertion of synonymy relationships between taxonomic classifications. In: Börner, K., Gröhn, M., Park, J., Roberts, J. (Eds.) Visualization and Data Analysis 2008, Proceedings of the SPIE, 6809, () (). (pp. 680906-680912). San Jose, CA: Society of Photo-Optical Instrumentation Engineers, Bellingham, WA, ETATS-UNIS .

Graham, M., Kennedy, J. (2008). Multiform Views of Multiple Trees. In: (Ed.) Proceedings of IV2008, , () (). (pp. 252-257). London, UK: IEEE Computer Society Press.

Graham, M., Kennedy, J. (2007). Exploring Multiple Trees through DAG Representations. IEEE Transactions on Visualization and Computer Graphics, 13, (6), 1294-1301.

Craig, P., Kennedy, J. (2007, ). Concept Relationship Editor: A visual interface to support the creation of relationships between taxonomic classifications (poster). Paper presented at InfoVis2007, Sacramento CA.

Graham, M., Kennedy, J. (2007). Visual Exploration of Alternative Taxonomies through Concepts. Ecological Informatics, 2, (3), 248-261.

Kennedy, J., Gales, R., Kukla, R. (2006). Converting an Existing Taxonomic Data Resource to Employ an Ontology and LSIDs. In: Belbin, L., Rissoné, A., Weitzman, A. (Eds.) Proceedings of TDWG (2006), St Louis, MI., , () (). (pp. ). : .

Kennedy, J., Gales, R., Kukla, R., Hyam, R., Wieczorek, J., Hagedorn, G., Döring, M., Vieglais, D. (2006). Developing a Core Ontology for Taxonomic Data. In: Belbin, L., Rissoné, A., Weitzman, A. (Eds.) Proceedings of TDWG (2006), St Louis, MI, , () (). (pp. ). USA: .

Graham, M., Kennedy, J., Downey, L. (2006). Visual Comparison and Exploration of Natural History Collections. In: Celentano, A., Mussio, P. (Eds.) Advanced Visual Interfaces (AVI) 2006, , () (). (pp. 310-313). Venice, Italy: ACM Press.

Kennedy, J., Hyam, R., Kukla, R., Paterson, T. (2006). A Standard Data Model Representation for Taxonomic Information. OMICS: A Journal of Integrative Biology, 10, (2), 220-230.

Graham, M., Kennedy, J. (2005). Extending Taxonomic Visualisation to Incorporate Synonymy and Structural Markers. Information Visualization, 4, (3), 206-223.

Craig, P., Kennedy, J., Cumming, A. (2005). Time-series Explorer: An Animated Information Visualisation for Microarray Time-course Data. BMC Bioinformatics 2005, 6, (3), P8.

Craig, P., Kennedy, J., Cumming, A. (2005). Coordinated Parallel Views for the Exploratory Analysis of Microarray Time-course Data. In: (Ed.) Proceedings of 3rd International Conference on Coordinated & Multiple Views in Exploratory Visualization, , () (). (pp. 3-14). London: IEEE Computer Society Press.

Kennedy, J., Kukla, R., Paterson, T. (2005). Scientific names are ambiguous as identifiers for biological taxa: their context and definition are required for accurate data integration. In: Ludaescher, B., Raschid, L. (Eds.) Data Integration in the Life Sciences, 3615, () (). (pp. 80-95). Berlin Heidelberg: Springer-Verlag.

Pullan, M., Armstrong, K., Paterson, T., Cannon, A., Kennedy, J. (2005). The Prometheus Description Model: An examination of the taxonomic description building process and its representation. Taxon, 54, (3), 751-765.

Craig, P., Kennedy, J., Cumming, A. (2005). Animated Interval Scatter-plot Views for the Exploratory Analysis of Large Scale Microarray Time-course Data. Information Visualization, 4, (3), 149-163.

Paterson, T., Kennedy, J., Pullan, M., Cannon, A., Armstrong, K., Watson, M., Raguenaud, C., McDonald, S., Russell, G. (2004). A Universal Character Model and Ontology of Defined Terms for Taxonomic Description. In: E.Rahm, E. (Ed.) Lecture Notes in Bioinformatics: Proceedings of Data Integration in the Life Sciences (DILS) Leipzig 2004, LNBI 2994, () (LNBI 2994). (pp. 63-78). : Springer-Verlag.

Graham, M., Kennedy, J. (2004). Exploring and Examining Assessment Data via a Matrix Visualisation. In: Costabile, M. (Eds.) Advanced Visual Interfaces (AVI) 2004, , () (). (pp. 158-162). Gallipoli, Italy: ACM Press.

Cannon, A., Kennedy, J., Paterson, T., Watson, M. (2004). Ontology-Driven Automated Generation Of Data Entry Interfaces. In: Williams, H., Mackinnon, L. (Eds.) Key Technologies for Data Management (Proc. BNCOD21): Lecture Notes in Computer Science 3112, , () (). (pp. 150-164). : Springer-Verlag.

Paterson, T., Kennedy, J. (2004). Approaches to Storing and Querying Structural Information in Botanical Specimen Descriptions. In: MacKinnon, L., Burger, A., Trinder, P. (Eds.) Proceedings of the 21st Annual British National Conference on Databases (BNCOD21), , () (). (pp. 80-91). Edinburgh: Heriot-Watt University.

Barclay, P., Griffiths, T., McKirdy, J., Kennedy, J., Cooper, R., Paton, N., Gray, P. (2003). Teallach - a Flexible User-Interface Development Environment for Object Database Applications. The Journal of Visual Languages and Computing, 14, (1), 47-77.

Paterson, T., Cannon, A., Raguenaud, C., Russell, G., Armstrong, K., MacDonald, S., Pullan, M., Watson, M., Kennedy, J. (2003). A Methodology for Composing Well-Defined Character Descriptions. Unpublished, (), .

Craig, P., Kennedy, J. (2003). Coordinated Graph and Scatter-Plot Views for the Visual Exploration of Microarray Time-Series Data. In: (Ed.) IEEE Symposium on Information Visualization, , () (). (pp. 173-180). Seattle WA: IEEE Computer Society Press.

Davenport, E., Graham, M., Kennedy, J., Taylor, K. (2003). Managing Social Capital as Knowledge Management - Some Specification and Representation Issues. In: (Ed.) Proc. ASIS&T, 40, () (). (pp. 101-108). Long Beach, California, USA: American Society for Information Science.

Kennedy, J. (2003). Supporting Taxonomic Names in Cell and Molecular Biology Databases. Omics A Journal of Integrative Biology, 7, (1), 13-16.

Graham, M., Kennedy, J. (2003). Using Curves to Enhance Parallel Coordinate Visualisations. In: (Ed.) IV 2003 - 7th International Conference on Information Visualization, , () (). (pp. 10-16). London, UK: IEEE Computer Society Press.

Raguenaud, C., Kennedy, J. (2002). Multiple Overlapping Classifications: Issues and Solutions. In: Kennedy, J. (Ed.) 14th International conference on Scientific and Statistical Database Management - SSDBM 2002, , () (). (pp. 77-86). : IEEE Computer Society Press.

Kennedy, J. (Eds.), (2002). Proceedings of the 14th International Conference on Scientific and Statistical Database Management, , () ( ed.). : IEEE Computer Society Press.

Graham, M., Watson, M., Kennedy, J. (2002). Novel visualisation techniques for working with multiple, overlapping classification hierarchies. Taxon, 51, (2), 351-358.

Raguenaud, C., Pullan, M., Watson, M., Kennedy, J., Newman, M., Barclay, P. (2002). Implementation of the Prometheus Taxonomic Model: a comparison of database systems. Taxon, 51, (1), 131-142.

Craig, P., Kennedy, J., Cumming, A. (2002). Towards Visualising Temporal Features in Large Scale Microarray Time-series Data. In: (Ed.) 6th International Conference on Information Visualisation - IV2002, , () (). (pp. 427-433). : IEEE Computer Society Press.

Raguenaud, C., Kennedy, J., Barclay, P. (2002). Querying the composite pattern in OQL. submitted to Information and Software Technology, (), .

Turner, S., Turner, P., Raguenaud, C., Kennedy, J. (2002). Telling Tales: Narratives Of Classification And Control In The Design Of Taxonomic Software. In: (Ed.) Proceedings of Design Research Society Conference: Common Ground, September, 2002, , () (). (pp. ). Brunel University: .

MacDonald, S., Raguenaud, C., Pullan, M., Kennedy, J., Russell, G., Watson, M. (2002). The Prometheus II Description Model: an objective approach to representing taxonomic descriptions. Unpublished, (), .

Roantree, M., Kennedy, J., Barclay, P. (2001). Using a Metadata Software Layer in Information Systems Integration. In: (Ed.) CAiSE'01 - Software Engineering meets Information Systems Engineering. Conference, , () (). (pp. ). Interlaken, Switzerland: Springer-Verlag.

Clyne, H., Kennedy, J. (2001). A Simulation of Interactions Between the Critically Endangered North Atlantic Right Whale Eubalaena glacialis and Shipping using Dynamically Variable Temporal Granularity to Minimise Run Time. In: (Ed.) MODSIM 2001 International congress on Modelling and Simulation, , () (). (pp. 813-818). : .

Raguenaud, C., Graham, M., Kennedy, J. (2001). Two Approaches to Representing Multiple Overlapping Classifications: a Comparison. In: Kerschberg, L., Kafatos, M. (Eds.) 13th International Conference on Scientific and Statistical Database Management - SSDBM 2001, , () (). (pp. 239-244). Fairfax, Virginia, USA: IEEE Computer Society Press.

Roantree, M., Kennedy, J., Barclay, P. (2001). Constructing View Schemata Using an Extended ODL. In: Batini, C., Giunchiglia, F., Giorgini, P., Mecella, M. (Eds.) Ninth International Conference on Cooperative Information Systems (CoopIS 2001), Volume2172, () (). (pp. ). : Springer-Verlag.

Graham, M., Kennedy, J. (2001). Combining linking & focusing techniques for a multiple hierarchy visualisation. In: Banissi, E., Khosrowshahi, F., Sarfraz, M., Ursyn, A. (Eds.) IV 2001 - 5th International Conference on Information Visualisation, , () (). (pp. 425-432). UK: IEEE Computer Society Press.

Griffiths, T., Barclay, P., Paton, N., McKirdy, J., Kennedy, J., Gray, P., Cooper, R., Goble, C., Pinherio da Silva, P. (2001). Teallach: A Model-Based User Interface Development Environment for Object Databases. Interacting with Computers, 14, (1), 33-72.

Roantree, M., Kennedy, J., Barclay, P. (2001). Interoperable Services for Federations of Database System. In: (Ed.) Fifth East-European Conference on Advances in Databases and Information Systems (ADBIS'2001), , () (). (pp. ). : Springer-Verlag.

Pullan, M., Watson, M., Kennedy, J., Raguenaud, C., Hyam, R. (2000). The Prometheus Taxonomic Model: a practical approach to representing multiple classification. Taxon, 49, (), 55-75.

Raguenaud, C., Kennedy, J., Barclay, P. (2000). The Prometheus Taxonomic Database. In: (Ed.) Bio-Informatics and Biomedical Engineering, 2000, , () (). (pp. 63-70). : IEEE Computer Society Press.

Graham, M., Kennedy, J., Benyon, D. (2000). Towards a methodology for developing visualizations. International Journal of Human-Computer Studies, 53, (), 789-807.

Cooper, R., McKirdy, J., Griffiths, T., Barclay, P., Paton, N., Gray, P., Kennedy, J., Goble, C. (2000). Conceptual Modelling for Database User Interfaces. In: Arisawa, H., Catarci, T. (Eds.) Visual Database Systems - VDB5, 2000, , () (). (pp. 129-138). : Kluwer.

Barclay, P., Kennedy, J. (2000). A Dual-level Presentation Model for Developing User-Interfaces. In: Gesu, V., Levialdi, S., Tarantino, L. (Eds.) ADVANCED VISUAL INTERFACES International Working Conference - AVI 2000, , () (). (pp. 151-154). : ACM Press.

Graham, M., Kennedy, J., Hand, C. (2000). A Comparison of Set-Based and Graph-Based Visualisations of Overlapping Classification Hierarchies. In: Gesu, V., Levialdi, S., Tarantino, L. (Eds.) ACM Advanced Visual Interfaces (AVI) 2000, , () (). (pp. 41-50). Italy: ACM Press.

Raguenaud, C., Kennedy, J., Barclay, P. (2000). The Prometheus Database for Taxonomy. In: Gunther, O., Lenz-H, J. (Eds.) 12th International Conference on Scientific and Statistical Database Management, SSDBM 2000, , () (). (pp. 250-252). : IEEE Computer Society Press.

Barclay, P., Griffiths, T., Kennedy, J., McKirdy, J., Paton, N., Cooper, R. (1999). The Teallach Tool: Using Models For Flexible User Interface Design. In: Vanderdonckt, J., Puerta, A. (Eds.) 3rd International Conference on Computer-Aided Des, , () (). (pp. ). Louvain-la-Neuve (Belgium): Kluwer.

Roantree, M., Kennedy, J., Barclay, P. (1999). Providing Views and Closure for the ODMG Object Model. Information and Software Technology, 41, (15), .

Griffiths, T., Barclay, P., McKirdy, J., Paton, N., Gray, P., Kennedy, J. (1999). Teallach: A Model-Based User Interface Development Environment for Object Databases. In: Paton, N., Griffiths, T. (Eds.) User Interfaces to Data Intensive Systems, , () (). (pp. 86-96). Edinburgh, Scotland: IEEE Computer Society Press.

Graham, M., Kennedy, J., Hand, C. (1999). The Challenge of Visualising Multiple Overlapping Classification. In: Paton, N., Griffiths, T. (Eds.) IEEE User Interfaces to Data Intensive Systems (UIDIS) 1999, , () (). (pp. 42-51). Scotland: IEEE Computer Society Press.

Russell, G., Barclay, P., Kennedy, J. (1998). Odmg c++ api: an implementation viewpoint. , (), .

Griffiths, T., McKirdy, J., Forrester, G., Paton, N., Barclay, P., Kennedy, J. (1998). An Open Model-Based Interface Development System: The Teallach Approach. In: Markopoulos, P., Johnson, P. (Eds.) 5th International Eurographics Workshop on Design, Specification and Verification of Interactive Systems - DSV-IS98, , () (). (pp. 62-49). Cosener's House, Abingdon, UK: .

Griffiths, T., McKirdy, J., Forrester, G., Paton, N., Kennedy, J., Barclay, P., Cooper, R., Goble, C., Gray, P. (1998). Exploiting Model Based Techniques for User Interfaces to Databases. In: Ioannidis, Y., Klas, W. (Eds.) ADVANCED VISUAL INTERFACES, VISUAL DATABASE SYSTEMS. International Working Conference - VDB4, 1998, , () (). (pp. 21-46). L'Aquilla, Italy: Chapman and Hall.

Roantree, M., Kennedy, J., Barclay, P. (1998). A Multidatabase Layer for the ODMG Object Model. In: (Ed.) 5th International Conference on Object-Oriented Information Systems, 1998, , () (). (pp. ). document: Springer-Verlag.

Griffiths, T., McKirdy, J., Paton, N., Kennedy, J., Cooper, R., Barclay, P., Goble, C., Gray, P., Smyth, M., West, A., Dinn, A. (1998). An Open Model-Based Interface Development System: The Teallach Approach. In: (Ed.) Proceedings of DSV-IS '98: 5th International Eurographics Workshop on Design, Specification and Verification of Interactive Systems, , () (). (pp. ). Cosener's House, Abingdon, UK: .

Gray, P., Griffiths, T., Cooper, R., Kennedy, J., McKirdy, J., Barclay, P. (1998). A Lightweight Presentation Model for Database User Interfaces. In: (Ed.) ERCIM'98, , () (). (pp. ). Stockholm: .

Mitchell, K., Kennedy, J., Barclay, P. (1997). Using Active Constructs in User-Interfaces to Object-Oriented Databases. In: (Ed.) in Procs of the 1st International Database enginee, , () (). (pp. 3-12,). Montreal, Canada,: IEEE Computer Society Press.

Li-Thiao-Te, P., Kennedy, J., Owens, J. (1997). Mechanisms for Data Interpretation of Metrics for OO Systems. In: (Ed.) 24th International Conference on Technology of Object-Oriented Languages and Systems, TOOLS Asia '97, , () (). (pp. ). Beijing, China: .

Mitchell, K., Kennedy, J. (1997). The Perspective Tunnel: An Inside View on Smoothly Integrating Detail and Context. In: (Ed.) Proc. of Eurographics Workshop on Visualisation in, , () (). (pp. ). Boulogne Sur Med, France: .

Li-Thiao-Te, P., Kennedy, J., Owens, J. (1997). Assessing Inheritance for the Multiple Descendant Redefinition Problem in OO Sys. In: Orlowska, M., Zicari, R. (Eds.) International Conference on Object Oriented Information Systems - OOIS’97, , () (). (pp. 197-210). Brisbane, Australia,: Springer-Verlag.

Kennedy, J., Mitchell, K., Barclay, P. (1996). A Framework for Information Visualisation. ACM SIGMOD Record, , (), .

Mitchell, K., Kennedy, J., Barclay, P. (1996). A framework for user-interfaces to databases. In: Catarci, T., Costabile, M., Levialdi, S., Santucci, G. (Eds.) International Workshop on Advanced Visual Interfaces, AVI'96, , () (). (pp. 81-90). Gubbio, Italy: ACM Press.

Kennedy, J., Barclay, P. (Eds.), (1996). Proceedings of 3rd International Workshop on Interfaces to Databases, ElectronicWorkshopsinComputing, () ( ed.). : Springer-Verlag.

Mitchell, K., Kennedy, J., Barclay, P. (1996). DRIVE: An environment for the orgainised construction of user interfaces to data. In: Kennedy, J., Barclay, P. (Eds.) 3rd International Workshop on User Interfaces to Databases - IDS3, 1996, ElectronicWorkshopsinComputing, () (). (pp. ). Napier University, Edinburgh: Springer-Verlag.

Lu, J., Barclay, P., Kennedy, J. (1996). On Tempopral Versioning in Object Oriented Databases. In: (Ed.) Modelling Business Information Systems, , () (). (pp. ). Cottbus, Germany: .

Kennedy, J., Mitchell, K., Barclay, P. (1996). Describing and Characterising Visualisations. In: (Ed.) 3rd FADIVA Workshop, , () (). (pp. ). Gubbio, Italy: .

Morrison, R., Kennedy, J. (Eds.), (1996). Proceedings of the 14th British National Conference on Database Systems, , () ( ed.). : Springer-Verlag.

Mitchell, K., Kennedy, J., Barclay, P. (1995). Using a conceptual language to describe a database and its interface. In: Goble, C., Keane, J. (Eds.) 13th British National Conference on Database - BNCOD13, 1995, , () (). (pp. 101-119). University of Manchester: Springer-Verlag.

Kennedy, J., Mitchell, K., Barclay, P. (1995). 3D Information visualisation: Identifying and measuring success. In: (Ed.) 2nd FADIVA Workshop, 1995, , () (). (pp. ). Glasgow University, Glasgow: .

Rapley, M., Kennedy, J. (1994). Three dimensional interface for an object oriented database. In: Sawyer, P. (Ed.) 2nd International Workshop on Interfaces to Databases - IDS2, 1994, 02:08, () (02:08). (pp. 133-158). : Springer-Verlag.

Barclay, P., Kennedy, J. (1994). A conceptual language for querying object oriented data. In: D.S.Bowers, D. (Ed.) 12th British National Conference on Database: Directions in Databases - BNCOD12, 1994, , () (). (pp. 187-204). University of Surrey: Springer-Verlag.

Barclay, P., Kennedy, J. (1993). Viewing objects. In: Worboys, M., A.F.Grundy, A. (Eds.) 11th British National Conference on Database Sys, , () (). (pp. 93-110). Keele: Springer-Verlag.

Barclay, P., Kennedy, J. (1992). Modelling Ecological Data. In: Hinterberger, H., French, J. (Eds.) 6th International Workshop on Scientific and Statistical Database Management, 1992, , () (). (pp. ). Switzerland: .

Barclay, P., Kennedy, J. (1992). Semantic Integrity for Persistent Objects. Information and Software Technology, 34, (8), 533 - 541.

Barclay, P., Fraser, C., Kennedy, J. (1992). Using a persistent system to construct a customised interface to an ecological db. In: Cooper, R. (Ed.) 1st International workshop on Interfaces to Datab, , () (). (pp. ). Glasgow: Springer-Verlag.

Barclay, P., Kennedy, J. (1991). Regaining the conceptual level in object oriented modelling. In: M.S.Jackson, M., A.E.Robinson, A. (Eds.) 9th British National Conference on Database - BNCOD9, 1991, , () (). (pp. 269-305). Wolverhampton: Butterworth Heinemann.

Kennedy, J., Crerar, A. (1989). The information retrieval facilities of Generis, a knowledge base management system. In: (Ed.) 11th Information Retrieval Research Colloquium, 1989, , () (). (pp. ). Huddersfield Polytechnic: .

Kennedy, J., Crerar, A. (1989). The Generis Knowledge Base Management System - an exploratory review. In: (Ed.) Working Conference on Data and Knowledge Integration, 1989, , () (). (pp. ). University of Keele: .